SNAP Library 2.1, Developer Reference
2013-09-25 10:47:25
SNAP, a general purpose, high performance system for analysis and manipulation of large networks
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#include <ff.h>
Public Types | |
enum | TStopReason { srUndef, srOk, srFlood, srTimeLimit } |
Public Member Functions | |
TFfGGen (const bool &BurnExpFireP, const int &StartNNodes, const double &ForwBurnProb, const double &BackBurnProb, const double &DecayProb, const double &Take2AmbasPrb, const double &OrphanPrb) | |
PNGraph | GetGraph () const |
void | SetGraph (const PNGraph &NGraph) |
void | Clr () |
TStr | GetParamStr () const |
TStopReason | AddNodes (const int &GraphNodes, const bool &FloodStop=true) |
TStopReason | GenGraph (const int &GraphNodes, const bool &FloodStop=true) |
TStopReason | GenGraph (const int &GraphNodes, PGStatVec &EvolStat, const bool &FloodStop=true) |
void | PlotFireSize (const TStr &FNmPref, const TStr &DescStr) |
Static Public Member Functions | |
static void | GenFFGraphs (const double &FProb, const double &BProb, const TStr &FNm) |
Static Public Attributes | |
static int | TimeLimitSec = 30*60 |
Private Attributes | |
PNGraph | Graph |
TBool | BurnExpFire |
TInt | StartNodes |
TFlt | FwdBurnProb |
TFlt | BckBurnProb |
TFlt | ProbDecay |
TFlt | Take2AmbProb |
TFlt | OrphanProb |
Forest Fire Graph Generator. For more details is "Graph Evolution: Densification and Shrinking Diameters" by J. Leskovec, J. Kleinberg, C. Faloutsos. ACM Transactions on Knowledge Discovery from Data (TKDD), 1(1), 2007.
enum TFfGGen::TStopReason |
Definition at line 51 of file ff.h.
{ srUndef, srOk, srFlood, srTimeLimit } TStopReason;
TFfGGen::TFfGGen | ( | const bool & | BurnExpFireP, |
const int & | StartNNodes, | ||
const double & | ForwBurnProb, | ||
const double & | BackBurnProb, | ||
const double & | DecayProb, | ||
const double & | Take2AmbasPrb, | ||
const double & | OrphanPrb | ||
) |
Definition at line 260 of file ff.cpp.
: Graph(), BurnExpFire(BurnExpFireP), StartNodes(StartNNodes), FwdBurnProb(ForwBurnProb), BckBurnProb(BackBurnProb), ProbDecay(DecayProb), Take2AmbProb(Take2AmbasPrb), OrphanProb(OrphanPrb) { //IAssert(ProbDecay == 1.0); // do not need Decay any more }
TFfGGen::TStopReason TFfGGen::AddNodes | ( | const int & | GraphNodes, |
const bool & | FloodStop = true |
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) |
Definition at line 272 of file ff.cpp.
References TNGraph::AddEdge(), TNGraph::AddNode(), BckBurnProb, TForestFire::BurnExpFire(), BurnExpFire, TForestFire::BurnGeoFire(), TPt< TRec >::Empty(), FwdBurnProb, TForestFire::GetBurned(), TForestFire::GetBurnedNId(), TNGraph::GetEdges(), TNGraph::GetNodes(), TExeTm::GetSecs(), TExeTm::GetStr(), TRnd::GetUniDev(), TRnd::GetUniDevInt(), TVec< TInt >::GetV(), Graph, IAssert, TForestFire::Infect(), Kilo, TPt< TNGraph >::New(), OrphanProb, ProbDecay, srFlood, srOk, srTimeLimit, StartNodes, Take2AmbProb, and TimeLimitSec.
Referenced by GenGraph().
{ printf("\n***ForestFire: %s Nodes:%d StartNodes:%d Take2AmbProb:%g\n", BurnExpFire?"ExpFire":"GeoFire", GraphNodes, StartNodes(), Take2AmbProb()); printf(" FwdBurnP:%g BckBurnP:%g ProbDecay:%g Orphan:%g\n", FwdBurnProb(), BckBurnProb(), ProbDecay(), OrphanProb()); TExeTm ExeTm; int Burned1=0, Burned2=0, Burned3=0; // last 3 fire sizes // create initial set of nodes if (Graph.Empty()) { Graph = PNGraph::New(); } if (Graph->GetNodes() == 0) { for (int n = 0; n < StartNodes; n++) { Graph->AddNode(); } } int NEdges = Graph->GetEdges(); // forest fire TRnd Rnd(0); TForestFire ForestFire(Graph, FwdBurnProb, BckBurnProb, ProbDecay, 0); // add nodes for (int NNodes = Graph->GetNodes()+1; NNodes <= GraphNodes; NNodes++) { const int NewNId = Graph->AddNode(-1); IAssert(NewNId == Graph->GetNodes()-1); // node ids have to be 0...N // not an Orphan (burn fire) if (OrphanProb == 0.0 || Rnd.GetUniDev() > OrphanProb) { // infect ambassadors if (Take2AmbProb == 0.0 || Rnd.GetUniDev() > Take2AmbProb || NewNId < 2) { ForestFire.Infect(Rnd.GetUniDevInt(NewNId)); // take 1 ambassador } else { const int AmbassadorNId1 = Rnd.GetUniDevInt(NewNId); int AmbassadorNId2 = Rnd.GetUniDevInt(NewNId); while (AmbassadorNId1 == AmbassadorNId2) { AmbassadorNId2 = Rnd.GetUniDevInt(NewNId); } ForestFire.Infect(TIntV::GetV(AmbassadorNId1, AmbassadorNId2)); // take 2 ambassadors } // burn fire if (BurnExpFire) { ForestFire.BurnExpFire(); } else { ForestFire.BurnGeoFire(); } // add edges to burned nodes for (int e = 0; e < ForestFire.GetBurned(); e++) { Graph->AddEdge(NewNId, ForestFire.GetBurnedNId(e)); NEdges++; } Burned1=Burned2; Burned2=Burned3; Burned3=ForestFire.GetBurned(); } else { // Orphan (zero out-links) Burned1=Burned2; Burned2=Burned3; Burned3=0; } if (NNodes % Kilo(1) == 0) { printf("(%d, %d) burned: [%d,%d,%d] [%s]\n", NNodes, NEdges, Burned1, Burned2, Burned3, ExeTm.GetStr()); } if (FloodStop && NEdges>GraphNodes && (NEdges/double(NNodes)>1000.0)) { // average node degree is more than 500 printf(". FLOOD. G(%6d, %6d)\n", NNodes, NEdges); return srFlood; } if (NNodes % 1000 == 0 && TimeLimitSec > 0 && ExeTm.GetSecs() > TimeLimitSec) { printf(". TIME LIMIT. G(%d, %d)\n", Graph->GetNodes(), Graph->GetEdges()); return srTimeLimit; } } IAssert(Graph->GetEdges() == NEdges); return srOk; }
void TFfGGen::Clr | ( | ) | [inline] |
void TFfGGen::GenFFGraphs | ( | const double & | FProb, |
const double & | BProb, | ||
const TStr & | FNm | ||
) | [static] |
Definition at line 358 of file ff.cpp.
References TVec< TVal, TSizeTy >::Add(), TGStat::AllStat(), TStr::Fmt(), GenGraph(), gsvNodes, IAssert, TVec< TVal, TSizeTy >::Len(), TGStat::NDiamRuns, TGStatVec::New(), and tmuNodes.
{ const int NRuns = 10; const int NNodes = 10000; TGStat::NDiamRuns = 10; //const double FProb = 0.35, BProb = 0.20; // ff1 //const double FProb = 0.37, BProb = 0.32; // ff2 //const double FProb = 0.37, BProb = 0.325; // ff22 //const double FProb = 0.37, BProb = 0.33; // ff3 //const double FProb = 0.37, BProb = 0.35; // ff4 //const double FProb = 0.38, BProb = 0.35; // ff5 TVec<PGStatVec> GAtTmV; TFfGGen FF(false, 1, FProb, BProb, 1.0, 0, 0); for (int r = 0; r < NRuns; r++) { PGStatVec GV = TGStatVec::New(tmuNodes, TGStat::AllStat()); FF.GenGraph(NNodes, GV, true); for (int i = 0; i < GV->Len(); i++) { if (i == GAtTmV.Len()) { GAtTmV.Add(TGStatVec::New(tmuNodes, TGStat::AllStat())); } GAtTmV[i]->Add(GV->At(i)); } IAssert(GAtTmV.Len() == GV->Len()); } PGStatVec AvgStat = TGStatVec::New(tmuNodes, TGStat::AllStat()); for (int i = 0; i < GAtTmV.Len(); i++) { AvgStat->Add(GAtTmV[i]->GetAvgGStat(false)); } AvgStat->PlotAllVsX(gsvNodes, FNm, TStr::Fmt("Forest Fire: F:%g B:%g (%d runs)", FProb, BProb, NRuns)); AvgStat->Last()->PlotAll(FNm, TStr::Fmt("Forest Fire: F:%g B:%g (%d runs)", FProb, BProb, NRuns)); }
TFfGGen::TStopReason TFfGGen::GenGraph | ( | const int & | GraphNodes, |
const bool & | FloodStop = true |
||
) |
Definition at line 327 of file ff.cpp.
References AddNodes(), Graph, and TPt< TNGraph >::New().
Referenced by GenFFGraphs(), TForestFire::GenGraph(), and main().
{ Graph = PNGraph::New(); return AddNodes(GraphNodes, FloodStop); }
TFfGGen::TStopReason TFfGGen::GenGraph | ( | const int & | GraphNodes, |
PGStatVec & | EvolStat, | ||
const bool & | FloodStop = true |
||
) |
Definition at line 332 of file ff.cpp.
References AddNodes(), TNGraph::GetNodes(), Graph, TPt< TNGraph >::New(), srOk, srUndef, and StartNodes.
{ int GrowthStatNodes = 100; Graph = PNGraph::New(); AddNodes(StartNodes); TStopReason SR = srUndef; while (Graph->GetNodes() < GraphNodes) { SR = AddNodes(GrowthStatNodes, FloodStop); if (SR != srOk) { return SR; } EvolStat->Add(Graph, TSecTm(Graph->GetNodes())); GrowthStatNodes = int(1.5*GrowthStatNodes); } return SR; }
PNGraph TFfGGen::GetGraph | ( | ) | const [inline] |
TStr TFfGGen::GetParamStr | ( | ) | const |
Definition at line 267 of file ff.cpp.
References BckBurnProb, BurnExpFire, TStr::Fmt(), FwdBurnProb, OrphanProb, ProbDecay, StartNodes, and Take2AmbProb.
{ return TStr::Fmt("%s FWD:%g BCK:%g, StartNds:%d, Take2:%g, Orphan:%g, ProbDecay:%g", BurnExpFire?"EXP":"GEO", FwdBurnProb(), BckBurnProb(), StartNodes(), Take2AmbProb(), OrphanProb(), ProbDecay()); }
void TFfGGen::PlotFireSize | ( | const TStr & | FNmPref, |
const TStr & | DescStr | ||
) |
Definition at line 346 of file ff.cpp.
References TVec< TVal, TSizeTy >::Add(), TGnuPlot::AddPlot(), TNGraph::BegNI(), TStr::CStr(), TNGraph::EndNI(), TStr::Fmt(), TNGraph::GetEdges(), TNGraph::GetNodes(), gpwImpulses, Graph, TGnuPlot::SavePng(), TGnuPlot::SetXYLabel(), and TVec< TVal, TSizeTy >::Sort().
{ TGnuPlot GnuPlot("fs."+FNmPref, TStr::Fmt("%s. Fire size. G(%d, %d)", DescStr.CStr(), Graph->GetNodes(), Graph->GetEdges())); GnuPlot.SetXYLabel("Vertex id (iterations)", "Fire size (node out-degree)"); TFltPrV IdToOutDegV; for (TNGraph::TNodeI NI = Graph->BegNI(); NI < Graph->EndNI(); NI++) { IdToOutDegV.Add(TFltPr(NI.GetId(), NI.GetOutDeg())); } IdToOutDegV.Sort(); GnuPlot.AddPlot(IdToOutDegV, gpwImpulses, "Node out-degree"); GnuPlot.SavePng(); }
void TFfGGen::SetGraph | ( | const PNGraph & | NGraph | ) | [inline] |
TFlt TFfGGen::BckBurnProb [private] |
Definition at line 58 of file ff.h.
Referenced by AddNodes(), and GetParamStr().
TBool TFfGGen::BurnExpFire [private] |
Definition at line 56 of file ff.h.
Referenced by AddNodes(), and GetParamStr().
TFlt TFfGGen::FwdBurnProb [private] |
Definition at line 58 of file ff.h.
Referenced by AddNodes(), and GetParamStr().
PNGraph TFfGGen::Graph [private] |
Definition at line 54 of file ff.h.
Referenced by AddNodes(), Clr(), GenGraph(), GetGraph(), PlotFireSize(), and SetGraph().
TFlt TFfGGen::OrphanProb [private] |
Definition at line 59 of file ff.h.
Referenced by AddNodes(), and GetParamStr().
TFlt TFfGGen::ProbDecay [private] |
Definition at line 58 of file ff.h.
Referenced by AddNodes(), and GetParamStr().
TInt TFfGGen::StartNodes [private] |
Definition at line 57 of file ff.h.
Referenced by AddNodes(), GenGraph(), and GetParamStr().
TFlt TFfGGen::Take2AmbProb [private] |
Definition at line 59 of file ff.h.
Referenced by AddNodes(), and GetParamStr().
int TFfGGen::TimeLimitSec = 30*60 [static] |
Definition at line 52 of file ff.h.
Referenced by AddNodes().